PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca3955.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family NAC
Protein Properties Length: 166aa    MW: 18886.4 Da    PI: 10.4878
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca3955.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM67.53.9e-2188954128
        NAM  54 eekewyfFskrdkkyatgkrknratk......sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                + +  +fF++ +k+y+tg+rk+r+++      + +W++tgk+++vl  +g++ g kk+Lv+y   g+++k++kt+Wvmh+y+l
  Dca3955.1   8 DGQIRHFFHRPSKAYTTGTRKRRKVHtdedgsETRWHKTGKTRPVLI-NGRVRGYKKILVLYtnYGKQRKPQKTSWVMHQYHL 89 
                44456******************744446555788************.999***********6658999************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.1251108IPR003441NAC domain
SuperFamilySSF1019412.22E-238108IPR003441NAC domain
PfamPF023659.6E-81389IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
MKGGVNKDGQ IRHFFHRPSK AYTTGTRKRR KVHTDEDGSE TRWHKTGKTR PVLINGRVRG  60
YKKILVLYTN YGKQRKPQKT SWVMHQYHLG IDEEEKDGEL VVSKVFYQTQ PRQCGSILKL  120
GGKTGTPSTR NEASEYYNQT SVISFEQRSS GPGTGSTTVV FPFCCP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010689784.11e-94PREDICTED: NAC domain-containing protein 8-like
SwissprotO494593e-68NAC73_ARATH; NAC domain-containing protein 73
TrEMBLA0A0J8EG201e-94A0A0J8EG20_BETVU; Uncharacterized protein
STRINGVIT_12s0028g03050.t017e-73(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.12e-69NAC domain containing protein 73